Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rprl1-201ENSMUST00000158050 327 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Mir7085-201ENSMUST00000184353 66 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm25214-201ENSMUST00000104573 129 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm14247-201ENSMUST00000120950 237 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm8062-201ENSMUST00000139696 444 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm29396-201ENSMUST00000185659 716 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 AY702102-202ENSMUST00000194651 1173 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm19994-201ENSMUST00000217086 586 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cstf3Q99LI7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms