Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm18367-201ENSMUST00000176139 600 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm7593-201ENSMUST00000187246 644 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm42657-201ENSMUST00000201746 211 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm25076-201ENSMUST00000104098 132 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm11783-201ENSMUST00000119549 885 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Mir1956-201ENSMUST00000157748 65 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm37028-201ENSMUST00000194276 107 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm6450-201ENSMUST00000200896 574 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd2Q99JR8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm26013-201ENSMUST00000104404 119 ntBASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms