Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Gm15610-201ENSMUST00000120584 195 ntBASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm14247-201ENSMUST00000120950 237 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm9002-201ENSMUST00000178437 499 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm27847-201ENSMUST00000183711 107 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm27375-201ENSMUST00000183799 107 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Thumpd1Q99J36 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.67□□□□□ -0.7
Thumpd1Q99J36 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms