Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm27516-201ENSMUST00000184237 98 ntBASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm29396-201ENSMUST00000185659 716 ntBASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm13316-201ENSMUST00000140537 691 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm44364-201ENSMUST00000198368 141 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Olfr284-202ENSMUST00000206647 966 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm9368-201ENSMUST00000219348 831 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga11Q91XY8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gm12241-201ENSMUST00000118330 726 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms