Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm4986-201ENSMUST00000119731 549 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Olfr284-202ENSMUST00000206647 966 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm18935-201ENSMUST00000212692 664 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdhga3Q91XY5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm13297-201ENSMUST00000120205 934 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms