Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Rprl1-201ENSMUST00000158050 327 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm6013-201ENSMUST00000212264 699 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm10478-201ENSMUST00000084451 396 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.07□□□□□ -0.8
H1fooQ8VIK3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm12036-201ENSMUST00000120008 530 ntBASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
H1fooQ8VIK3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms