Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3a1Q8K4Z5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3a1Q8K4Z5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3a1Q8K4Z5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3a1Q8K4Z5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3a1Q8K4Z5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Sf3a1Q8K4Z5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm15236-201ENSMUST00000117309 379 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm15610-201ENSMUST00000120584 195 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm24749-201ENSMUST00000157838 343 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm29615-201ENSMUST00000185371 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28224-201ENSMUST00000186078 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm29001-201ENSMUST00000186177 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28292-201ENSMUST00000186593 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28101-201ENSMUST00000187608 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm29076-201ENSMUST00000187689 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28302-201ENSMUST00000187931 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28646-201ENSMUST00000188220 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28205-201ENSMUST00000189177 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm29032-201ENSMUST00000189797 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm28695-201ENSMUST00000190300 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gm37448-201ENSMUST00000192795 697 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sf3a1Q8K4Z5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm22133-201ENSMUST00000102082 109 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm14017-201ENSMUST00000121934 386 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm27627-201ENSMUST00000183644 150 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm17931-201ENSMUST00000208132 634 ntBASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a1Q8K4Z5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms