Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Gm11637-201ENSMUST00000120601 592 ntBASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Mir6977-201ENSMUST00000184960 64 ntBASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Mir7654-201ENSMUST00000185082 70 ntBASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Gm43002-201ENSMUST00000200310 155 ntBASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Gm8598-201ENSMUST00000221184 836 ntBASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf4Q8K4J2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm24830-201ENSMUST00000102024 166 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm6007-201ENSMUST00000208170 823 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm26232-201ENSMUST00000083360 166 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf4Q8K4J2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf4Q8K4J2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf4Q8K4J2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Ebf4Q8K4J2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Syt7-204ENSMUST00000223586 1344 ntBASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms