Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Clrn1Q8K445 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Clrn1Q8K445 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Clrn1Q8K445 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Clrn1Q8K445 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm14247-201ENSMUST00000120950 237 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Clrn1Q8K445 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm25668-201ENSMUST00000157700 129 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm32999-201ENSMUST00000192693 562 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 AA914427-201ENSMUST00000193194 1166 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm38317-201ENSMUST00000195564 343 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm44967-201ENSMUST00000207047 631 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.33□□□□□ -0.6
Clrn1Q8K445 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.33□□□□□ -0.6
Clrn1Q8K445 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clrn1Q8K445 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.32□□□□□ -0.6
Clrn1Q8K445 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.32□□□□□ -0.6
Clrn1Q8K445 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.32□□□□□ -0.6
Clrn1Q8K445 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.32□□□□□ -0.6
Clrn1Q8K445 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm15610-201ENSMUST00000120584 195 ntBASIC11.32□□□□□ -0.6
Clrn1Q8K445 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.32□□□□□ -0.6
Clrn1Q8K445 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms