Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Gm11700-201ENSMUST00000119409 403 ntBASIC14.81□□□□□ -0.04
Smc5Q8CG46 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.81□□□□□ -0.04
Smc5Q8CG46 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Gm43133-201ENSMUST00000197472 463 ntBASIC14.81□□□□□ -0.04
Smc5Q8CG46 Gm43118-201ENSMUST00000199149 775 ntBASIC14.81□□□□□ -0.04
Smc5Q8CG46 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Smc5Q8CG46 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.81□□□□□ -0.04
Smc5Q8CG46 Gm10254-201ENSMUST00000052888 867 ntBASIC14.81□□□□□ -0.04
Smc5Q8CG46 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.81□□□□□ -0.04
Smc5Q8CG46 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc5Q8CG46 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.8□□□□□ -0.04
Smc5Q8CG46 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm14644-201ENSMUST00000116671 647 ntBASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm11439-201ENSMUST00000118598 409 ntBASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm11960-201ENSMUST00000122068 925 ntBASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Mospd4-201ENSMUST00000180618 576 ntBASIC14.8□□□□□ -0.04
Smc5Q8CG46 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm19309-201ENSMUST00000218295 205 ntBASIC14.8□□□□□ -0.04
Smc5Q8CG46 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc5Q8CG46 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc5Q8CG46 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc5Q8CG46 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.79□□□□□ -0.04
Smc5Q8CG46 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.79□□□□□ -0.04
Smc5Q8CG46 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.79□□□□□ -0.04
Smc5Q8CG46 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Gm7964-201ENSMUST00000051522 1378 ntBASIC14.79□□□□□ -0.04
Smc5Q8CG46 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc5Q8CG46 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms