Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm22133-201ENSMUST00000102082 109 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm27627-201ENSMUST00000183644 150 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm8956-201ENSMUST00000203939 825 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm45186-201ENSMUST00000206874 478 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf1Q8CFK2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm29615-201ENSMUST00000185371 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28224-201ENSMUST00000186078 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm29001-201ENSMUST00000186177 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28292-201ENSMUST00000186593 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28101-201ENSMUST00000187608 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm29076-201ENSMUST00000187689 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28302-201ENSMUST00000187931 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28646-201ENSMUST00000188220 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28205-201ENSMUST00000189177 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm29032-201ENSMUST00000189797 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm28695-201ENSMUST00000190300 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm37448-201ENSMUST00000192795 697 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 AY036118-201ENSMUST00000200021 923 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Brf1Q8CFK2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.46□□□□□ -0.1
Brf1Q8CFK2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf1Q8CFK2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Brf1Q8CFK2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf1Q8CFK2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Brf1Q8CFK2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf1Q8CFK2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Gm26286-201ENSMUST00000104166 134 ntBASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Gm17827-201ENSMUST00000211825 742 ntBASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf1Q8CFK2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms