Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gm23596-201ENSMUST00000104304 132 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gm7851-201ENSMUST00000117574 323 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gm9132-201ENSMUST00000210182 832 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Gm807-202ENSMUST00000224929 408 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc17Q8CE13 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm24934-201ENSMUST00000103764 111 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm27530-201ENSMUST00000184096 98 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.53□□□□□ -0.4
Ccdc17Q8CE13 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc17Q8CE13 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm11941-201ENSMUST00000119904 610 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm270-201ENSMUST00000223010 976 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Gm26448-201ENSMUST00000082446 203 ntBASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc17Q8CE13 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms