Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Mir1247-201ENSMUST00000116706 82 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm27516-201ENSMUST00000184237 98 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm38266-201ENSMUST00000194931 421 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc87Q8CDL9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Gm5904-201ENSMUST00000210286 865 ntBASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc87Q8CDL9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms