Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tsen54Q8C2A2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Mir686-201ENSMUST00000102174 109 ntBASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tsen54Q8C2A2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Gm37922-201ENSMUST00000195596 455 ntBASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tsen54Q8C2A2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms