Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf3Q8C120 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf3Q8C120 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm13350-201ENSMUST00000120519 479 ntBASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm17376-201ENSMUST00000166016 84 ntBASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm3961-201ENSMUST00000204425 994 ntBASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf3Q8C120 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gm11989-201ENSMUST00000117240 672 ntBASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gm11362-201ENSMUST00000118838 850 ntBASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf3Q8C120 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm14381-201ENSMUST00000122105 414 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms