Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm15515-201ENSMUST00000117827 822 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm12196-201ENSMUST00000120954 262 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Mir7070-201ENSMUST00000183657 86 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup54Q8BTS4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.27□□□□□ -0.44
Nup54Q8BTS4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.27□□□□□ -0.45
Nup54Q8BTS4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm18734-201ENSMUST00000172937 808 ntBASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm27530-201ENSMUST00000184096 98 ntBASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm28686-201ENSMUST00000187404 609 ntBASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm21811-201ENSMUST00000096485 930 ntBASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup54Q8BTS4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms