Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gm8285-201ENSMUST00000208293 759 ntBASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scfd1Q8BRF7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm11783-201ENSMUST00000119549 885 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm11667-201ENSMUST00000119828 486 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm14585-201ENSMUST00000120713 634 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm14441-201ENSMUST00000121960 540 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm8737-201ENSMUST00000122208 642 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scfd1Q8BRF7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Cog3-203ENSMUST00000227473 4197 ntBASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Gm22711-201ENSMUST00000116890 133 ntBASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Gm23045-201ENSMUST00000175041 96 ntBASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Gm6114-201ENSMUST00000182472 968 ntBASIC13.67□□□□□ -0.22
Scfd1Q8BRF7 Gm28937-201ENSMUST00000185413 695 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms