Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm27023-201ENSMUST00000182372 285 ntBASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4Q8BQZ5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Cpsf4Q8BQZ5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4Q8BQZ5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4Q8BQZ5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4Q8BQZ5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4Q8BQZ5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Mir877-201ENSMUST00000104738 85 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm14832-201ENSMUST00000121289 322 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm15547-201ENSMUST00000122152 333 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm25668-201ENSMUST00000157700 129 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm8885-201ENSMUST00000189382 598 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms