Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm23949-201ENSMUST00000104027 127 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm14058-201ENSMUST00000116082 735 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm12291-201ENSMUST00000121627 311 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm22138-201ENSMUST00000158748 128 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm34023-201ENSMUST00000195539 217 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm12380-201ENSMUST00000119012 544 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm45574-201ENSMUST00000210921 331 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm22058-201ENSMUST00000083393 310 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf38bQ80SY5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm23251-201ENSMUST00000103773 110 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms