Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Rprl1-201ENSMUST00000158050 327 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm22334-201ENSMUST00000158070 133 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm23699-201ENSMUST00000158835 135 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh8Q7TSK3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms