Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gm13453-201ENSMUST00000118708 357 ntBASIC12.79□□□□□ -0.36
CtifQ6PEE2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gm21854-201ENSMUST00000179901 471 ntBASIC12.79□□□□□ -0.36
CtifQ6PEE2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CtifQ6PEE2 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm14767-201ENSMUST00000121559 586 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm6439-201ENSMUST00000199849 862 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms