Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm23912-201ENSMUST00000104687 87 ntBASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm14999-201ENSMUST00000121039 624 ntBASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm25261-201ENSMUST00000157416 134 ntBASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm37201-201ENSMUST00000191845 523 ntBASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gm25857-201ENSMUST00000082788 129 ntBASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smarcd3Q6P9Z1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm24934-201ENSMUST00000103764 111 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm12058-201ENSMUST00000118614 437 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm12036-201ENSMUST00000120008 530 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smarcd3Q6P9Z1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms