Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Gm22018-201ENSMUST00000104357 131 ntBASIC13.27□□□□□ -0.29
Krt39Q6IFX4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Mir1938-201ENSMUST00000158746 100 ntBASIC13.27□□□□□ -0.29
Krt39Q6IFX4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Gm19309-201ENSMUST00000218295 205 ntBASIC13.27□□□□□ -0.29
Krt39Q6IFX4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt39Q6IFX4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm5706-201ENSMUST00000181525 993 ntBASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm28882-201ENSMUST00000185504 314 ntBASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm38002-201ENSMUST00000193255 180 ntBASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm18711-201ENSMUST00000199341 750 ntBASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm17931-201ENSMUST00000208132 634 ntBASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt39Q6IFX4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm24845-201ENSMUST00000158034 109 ntBASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm25043-201ENSMUST00000158604 212 ntBASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm42627-201ENSMUST00000197347 224 ntBASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Gm6013-201ENSMUST00000212264 699 ntBASIC13.25□□□□□ -0.29
Krt39Q6IFX4 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms