Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm17391-201ENSMUST00000171036 126 ntBASIC14.09□□□□□ -0.15
Krt40Q6IFX3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Gm45113-201ENSMUST00000207518 165 ntBASIC14.09□□□□□ -0.15
Krt40Q6IFX3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Gm29787-201ENSMUST00000222129 849 ntBASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Krt40Q6IFX3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.08□□□□□ -0.15
Krt40Q6IFX3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt40Q6IFX3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt40Q6IFX3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt40Q6IFX3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Gm15131-201ENSMUST00000119124 595 ntBASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Gm4726-201ENSMUST00000135604 736 ntBASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Gm6019-201ENSMUST00000148369 736 ntBASIC14.08□□□□□ -0.16
Krt40Q6IFX3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Gm5051-201ENSMUST00000204085 485 ntBASIC14.08□□□□□ -0.16
Krt40Q6IFX3 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt40Q6IFX3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.07□□□□□ -0.16
Krt40Q6IFX3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Gm19459-201ENSMUST00000176240 835 ntBASIC14.07□□□□□ -0.16
Krt40Q6IFX3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Gm38151-201ENSMUST00000195085 289 ntBASIC14.07□□□□□ -0.16
Krt40Q6IFX3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Gm10179-201ENSMUST00000086233 688 ntBASIC14.07□□□□□ -0.16
Krt40Q6IFX3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Krt40Q6IFX3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Krt40Q6IFX3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms