Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm24279-201ENSMUST00000104236 131 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Mir453-201ENSMUST00000104732 82 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm7627-201ENSMUST00000183205 999 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 n-R5s71-201ENSMUST00000093668 119 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.22□□□□□ -0.13
Col11a2Q64739 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col11a2Q64739 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a2Q64739 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col11a2Q64739 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col11a2Q64739 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm3828-201ENSMUST00000121817 257 ntBASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm42660-201ENSMUST00000197733 947 ntBASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.21□□□□□ -0.13
Col11a2Q64739 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.21□□□□□ -0.13
Col11a2Q64739 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.21□□□□□ -0.13
Col11a2Q64739 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm9791-201ENSMUST00000060997 447 ntBASIC14.21□□□□□ -0.13
Col11a2Q64739 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a2Q64739 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.21□□□□□ -0.14
Col11a2Q64739 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Gm11475-201ENSMUST00000118482 476 ntBASIC14.21□□□□□ -0.14
Col11a2Q64739 Gm14165-201ENSMUST00000121456 952 ntBASIC14.21□□□□□ -0.14
Col11a2Q64739 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.21□□□□□ -0.14
Col11a2Q64739 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.21□□□□□ -0.14
Col11a2Q64739 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Col11a2Q64739 Gm29067-201ENSMUST00000190821 470 ntBASIC14.21□□□□□ -0.14
Col11a2Q64739 AC164087.2-201ENSMUST00000216206 1072 ntBASIC14.21□□□□□ -0.14
Col11a2Q64739 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.21□□□□□ -0.14
Col11a2Q64739 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Col11a2Q64739 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a2Q64739 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Col11a2Q64739 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col11a2Q64739 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.2□□□□□ -0.14
Col11a2Q64739 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Col11a2Q64739 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col11a2Q64739 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col11a2Q64739 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a2Q64739 Gm16219-201ENSMUST00000120096 274 ntBASIC14.2□□□□□ -0.14
Col11a2Q64739 Gm14034-201ENSMUST00000120147 551 ntBASIC14.2□□□□□ -0.14
Col11a2Q64739 Gm13981-201ENSMUST00000122360 447 ntBASIC14.2□□□□□ -0.14
Col11a2Q64739 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Col11a2Q64739 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms