Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Irf4Q64287 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.79□□□□□ -0.52
Irf4Q64287 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm8100-201ENSMUST00000182906 988 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Gm37246-201ENSMUST00000192665 835 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.79□□□□□ -0.52
Irf4Q64287 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm42997-202ENSMUST00000200321 985 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm1821-202ENSMUST00000227415 750 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Irf4Q64287 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm10288-201ENSMUST00000084614 537 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Irf4Q64287 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.79□□□□□ -0.52
Irf4Q64287 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Irf4Q64287 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Irf4Q64287 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Irf4Q64287 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Irf4Q64287 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.78□□□□□ -0.52
Irf4Q64287 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Irf4Q64287 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.78□□□□□ -0.52
Irf4Q64287 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm13611-201ENSMUST00000118269 318 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm14724-201ENSMUST00000118400 537 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm8566-201ENSMUST00000120174 465 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm11660-201ENSMUST00000120955 412 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm8199-201ENSMUST00000121323 823 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.78□□□□□ -0.52
Irf4Q64287 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.78□□□□□ -0.52
Irf4Q64287 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.78□□□□□ -0.52
Irf4Q64287 Gm22902-201ENSMUST00000158488 302 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Gm19353-201ENSMUST00000184561 445 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.78□□□□□ -0.52
Irf4Q64287 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.78□□□□□ -0.52
Irf4Q64287 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.78□□□□□ -0.52
Irf4Q64287 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Irf4Q64287 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Irf4Q64287 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.77□□□□□ -0.52
Irf4Q64287 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Irf4Q64287 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms