Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mre11Q61216 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mre11Q61216 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Mre11Q61216 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Mre11Q61216 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC14.46□□□□□ -0.09
Mre11Q61216 Gm6152-201ENSMUST00000151704 340 ntBASIC14.46□□□□□ -0.09
Mre11Q61216 Gm43438-201ENSMUST00000198133 379 ntBASIC14.46□□□□□ -0.09
Mre11Q61216 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.46□□□□□ -0.09
Mre11Q61216 CT025525.2-201ENSMUST00000227743 423 ntBASIC14.46□□□□□ -0.09
Mre11Q61216 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Gm42463-201ENSMUST00000198041 4886 ntBASIC14.46□□□□□ -0.09
Mre11Q61216 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mre11Q61216 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Mre11Q61216 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Mre11Q61216 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mre11Q61216 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.46□□□□□ -0.1
Mre11Q61216 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.46□□□□□ -0.1
Mre11Q61216 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Mre11Q61216 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mre11Q61216 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Mre11Q61216 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Mre11Q61216 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Gm9723-201ENSMUST00000192100 457 ntBASIC14.45□□□□□ -0.1
Mre11Q61216 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 CT009495.1-201ENSMUST00000224221 862 ntBASIC14.45□□□□□ -0.1
Mre11Q61216 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Mre11Q61216 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Mre11Q61216 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.45□□□□□ -0.1
Mre11Q61216 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.45□□□□□ -0.1
Mre11Q61216 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC14.45□□□□□ -0.1
Mre11Q61216 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Gm37954-201ENSMUST00000195400 2071 ntBASIC14.45□□□□□ -0.1
Mre11Q61216 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mre11Q61216 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.44□□□□□ -0.1
Mre11Q61216 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.44□□□□□ -0.1
Mre11Q61216 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC14.44□□□□□ -0.1
Mre11Q61216 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC14.44□□□□□ -0.1
Mre11Q61216 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mre11Q61216 Gm11964-201ENSMUST00000120982 444 ntBASIC14.44□□□□□ -0.1
Mre11Q61216 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Gm17208-201ENSMUST00000168388 535 ntBASIC14.44□□□□□ -0.1
Mre11Q61216 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.44□□□□□ -0.1
Mre11Q61216 Gm37042-201ENSMUST00000193816 581 ntBASIC14.44□□□□□ -0.1
Mre11Q61216 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mre11Q61216 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms