Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm12990-201ENSMUST00000120372 468 ntBASIC11.76□□□□□ -0.53
Sim2Q61079 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sim2Q61079 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.76□□□□□ -0.53
Sim2Q61079 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm5714-201ENSMUST00000197343 566 ntBASIC11.76□□□□□ -0.53
Sim2Q61079 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.76□□□□□ -0.53
Sim2Q61079 Mt1-202ENSMUST00000211807 1085 ntBASIC11.76□□□□□ -0.53
Sim2Q61079 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.76□□□□□ -0.53
Sim2Q61079 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm6722-201ENSMUST00000221586 390 ntBASIC11.76□□□□□ -0.53
Sim2Q61079 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.76□□□□□ -0.53
Sim2Q61079 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sim2Q61079 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sim2Q61079 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.76□□□□□ -0.53
Sim2Q61079 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sim2Q61079 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sim2Q61079 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm13549-201ENSMUST00000118339 796 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gm14942-201ENSMUST00000119642 336 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gm44506-201ENSMUST00000206278 965 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gm4604-201ENSMUST00000025040 390 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.75□□□□□ -0.53
Sim2Q61079 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sim2Q61079 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sim2Q61079 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sim2Q61079 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sim2Q61079 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.74□□□□□ -0.53
Sim2Q61079 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Sim2Q61079 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sim2Q61079 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sim2Q61079 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sim2Q61079 Gm12164-201ENSMUST00000121695 551 ntBASIC11.74□□□□□ -0.53
Sim2Q61079 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.74□□□□□ -0.53
Sim2Q61079 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.74□□□□□ -0.53
Sim2Q61079 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.74□□□□□ -0.53
Sim2Q61079 Gm37458-201ENSMUST00000194055 410 ntBASIC11.74□□□□□ -0.53
Sim2Q61079 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.74□□□□□ -0.53
Sim2Q61079 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.74□□□□□ -0.53
Sim2Q61079 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sim2Q61079 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms