Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Gm26831-201ENSMUST00000181458 1380 ntBASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tsr1Q5SWD9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm6461-201ENSMUST00000120015 633 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm7113-201ENSMUST00000120477 958 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm17063-201ENSMUST00000168135 456 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm9499-201ENSMUST00000180888 964 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm37922-201ENSMUST00000195596 455 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm44760-201ENSMUST00000206375 1173 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm29705-201ENSMUST00000212598 474 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsr1Q5SWD9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 AC154806.5-202ENSMUST00000227217 1443 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Gm25843-201ENSMUST00000122582 314 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Mir7085-201ENSMUST00000184353 66 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 AC158981.3-201ENSMUST00000226844 1024 ntBASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsr1Q5SWD9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms