Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps54Q5SPW0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Gm4310-201ENSMUST00000177847 889 ntBASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Gm21811-201ENSMUST00000096485 930 ntBASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps54Q5SPW0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm14058-201ENSMUST00000116082 735 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm13035-201ENSMUST00000117496 342 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm12501-201ENSMUST00000119163 529 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Mir6979-201ENSMUST00000183927 56 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm9555-201ENSMUST00000200908 583 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps54Q5SPW0 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Gm11660-201ENSMUST00000120955 412 ntBASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Gm12566-201ENSMUST00000121479 359 ntBASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Gm5733-201ENSMUST00000190232 939 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms