Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm1848-201ENSMUST00000120711 789 ntBASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm45575-201ENSMUST00000210283 548 ntBASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc88aQ5SNZ0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc88aQ5SNZ0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc88aQ5SNZ0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Mir671-201ENSMUST00000102432 98 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm12419-201ENSMUST00000116649 636 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm12030-201ENSMUST00000121917 223 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm45856-201ENSMUST00000212752 416 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm19640-201ENSMUST00000214849 464 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm37299-201ENSMUST00000193951 826 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm18460-201ENSMUST00000208088 464 ntBASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc88aQ5SNZ0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms