Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm12859-201ENSMUST00000117834 427 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm11439-201ENSMUST00000118598 409 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm28911-201ENSMUST00000188837 117 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm45668-201ENSMUST00000211271 493 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms