Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rc3h1Q4VGL6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Gm11660-201ENSMUST00000120955 412 ntBASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Mir6546-201ENSMUST00000184460 62 ntBASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rc3h1Q4VGL6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rc3h1Q4VGL6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Rc3h1Q4VGL6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm15595-201ENSMUST00000120840 961 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm13366-201ENSMUST00000122198 970 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm23958-201ENSMUST00000157207 105 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gm45770-201ENSMUST00000212105 616 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rc3h1Q4VGL6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Gm13809-201ENSMUST00000117921 597 ntBASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Gm24514-201ENSMUST00000174961 285 ntBASIC13.88□□□□□ -0.19
Rc3h1Q4VGL6 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms