Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Gm8712-201ENSMUST00000221090 701 ntBASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.77□□□□□ -0.37
Syne3Q4FZC9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm14109-201ENSMUST00000118814 309 ntBASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm24845-201ENSMUST00000158034 109 ntBASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syne3Q4FZC9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syne3Q4FZC9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms