Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim40Q3UWA4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm13369-201ENSMUST00000119442 987 ntBASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Mir1894-201ENSMUST00000122802 81 ntBASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm23119-201ENSMUST00000158610 140 ntBASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Gm5356-201ENSMUST00000093326 615 ntBASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim40Q3UWA4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm11803-201ENSMUST00000119966 444 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm4768-201ENSMUST00000206199 686 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm6007-201ENSMUST00000208170 823 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm45384-201ENSMUST00000210451 277 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Gm9908-201ENSMUST00000211534 448 ntBASIC11.24□□□□□ -0.61
Trim40Q3UWA4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim40Q3UWA4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms