Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm23200-201ENSMUST00000104379 132 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm11509-201ENSMUST00000117358 325 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm27530-201ENSMUST00000184096 98 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm28071-201ENSMUST00000190355 478 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nlrc4Q3UP24 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Gm15004-201ENSMUST00000119192 630 ntBASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Gm16505-201ENSMUST00000179981 232 ntBASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Gm270-201ENSMUST00000223010 976 ntBASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nlrc4Q3UP24 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nlrc4Q3UP24 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms