Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm8492-201ENSMUST00000182375 987 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Mir6998-201ENSMUST00000183343 64 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm28324-201ENSMUST00000187913 264 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.64□□□□□ -0.39
Upf3aQ3ULJ3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Gm37458-201ENSMUST00000194055 410 ntBASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Gm42518-201ENSMUST00000196277 938 ntBASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upf3aQ3ULJ3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gm11675-201ENSMUST00000121873 832 ntBASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Gm3150-201ENSMUST00000166418 204 ntBASIC12.62□□□□□ -0.39
Upf3aQ3ULJ3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms