Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Paupar-201ENSMUST00000194826 3482 ntBASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm27390-201ENSMUST00000184516 176 ntBASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.97□□□□□ -0.33
Snx27Q3UHD6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm13916-201ENSMUST00000117368 628 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm15566-201ENSMUST00000121130 590 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm9192-201ENSMUST00000183221 985 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Snx27Q3UHD6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Snx27Q3UHD6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Snx27Q3UHD6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms