Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Q3U6N9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U6N9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Q3U6N9 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Q3U6N9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Gm12208-201ENSMUST00000122004 163 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.42□□□□□ -0.58
Q3U6N9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.42□□□□□ -0.58
Q3U6N9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.42□□□□□ -0.58
Q3U6N9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Q3U6N9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Q3U6N9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.42□□□□□ -0.58
Q3U6N9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Q3U6N9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U6N9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Q3U6N9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.41□□□□□ -0.58
Q3U6N9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Q3U6N9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.41□□□□□ -0.58
Q3U6N9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.41□□□□□ -0.58
Q3U6N9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Q3U6N9 Gm11246-201ENSMUST00000120880 345 ntBASIC11.41□□□□□ -0.58
Q3U6N9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.41□□□□□ -0.58
Q3U6N9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U6N9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.41□□□□□ -0.58
Q3U6N9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Q3U6N9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.41□□□□□ -0.58
Q3U6N9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Mir7032-201ENSMUST00000185154 79 ntBASIC11.41□□□□□ -0.58
Q3U6N9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.41□□□□□ -0.58
Q3U6N9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gm44506-201ENSMUST00000206278 965 ntBASIC11.41□□□□□ -0.58
Q3U6N9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.41□□□□□ -0.58
Q3U6N9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.41□□□□□ -0.58
Q3U6N9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.41□□□□□ -0.58
Q3U6N9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Q3U6N9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Q3U6N9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Q3U6N9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U6N9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms