Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm5363-201ENSMUST00000211927 938 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.32□□□□□ -0.92
Cdx4Q07424 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.32□□□□□ -0.92
Cdx4Q07424 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx4Q07424 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.32□□□□□ -0.92
Cdx4Q07424 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm24830-201ENSMUST00000102024 166 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm24231-201ENSMUST00000104315 133 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm11531-201ENSMUST00000117614 555 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm12314-201ENSMUST00000118104 538 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx4Q07424 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm25890-201ENSMUST00000177643 165 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm22614-201ENSMUST00000178300 165 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm3096-201ENSMUST00000185770 364 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm13097-201ENSMUST00000210722 397 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Cdx4Q07424 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm22042-201ENSMUST00000082989 165 ntBASIC9.31□□□□□ -0.92
Cdx4Q07424 Gm26232-201ENSMUST00000083360 166 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms