Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Gm11511-201ENSMUST00000118146 540 ntBASIC11.83□□□□□ -0.52
Sox4Q06831 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Sox4Q06831 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.83□□□□□ -0.52
Sox4Q06831 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Gm42599-201ENSMUST00000201308 469 ntBASIC11.83□□□□□ -0.52
Sox4Q06831 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.83□□□□□ -0.52
Sox4Q06831 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sox4Q06831 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Sox4Q06831 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sox4Q06831 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox4Q06831 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox4Q06831 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox4Q06831 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm12217-201ENSMUST00000118858 696 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox4Q06831 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm8956-201ENSMUST00000203939 825 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox4Q06831 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox4Q06831 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Sox4Q06831 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.82□□□□□ -0.52
Sox4Q06831 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox4Q06831 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sox4Q06831 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Sox4Q06831 Gm26286-201ENSMUST00000104166 134 ntBASIC11.81□□□□□ -0.52
Sox4Q06831 Gm23200-201ENSMUST00000104379 132 ntBASIC11.81□□□□□ -0.52
Sox4Q06831 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox4Q06831 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Gm37466-201ENSMUST00000195692 652 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms