Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 Gm12795-201ENSMUST00000117594 539 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Gm13045-201ENSMUST00000119019 712 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.86□□□□□ -0.35
VcpQ01853 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.86□□□□□ -0.35
VcpQ01853 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.86□□□□□ -0.35
VcpQ01853 Gm38210-201ENSMUST00000191944 809 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Rprl1-202ENSMUST00000198476 238 ntBASIC12.86□□□□□ -0.35
VcpQ01853 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.86□□□□□ -0.35
VcpQ01853 Gm17812-201ENSMUST00000204935 318 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.86□□□□□ -0.35
VcpQ01853 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.86□□□□□ -0.35
VcpQ01853 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcpQ01853 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.85□□□□□ -0.35
VcpQ01853 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.85□□□□□ -0.35
VcpQ01853 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VcpQ01853 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
VcpQ01853 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.85□□□□□ -0.35
VcpQ01853 Gm37666-201ENSMUST00000194110 866 ntBASIC12.85□□□□□ -0.35
VcpQ01853 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.85□□□□□ -0.35
VcpQ01853 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
VcpQ01853 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VcpQ01853 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VcpQ01853 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.85□□□□□ -0.35
VcpQ01853 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VcpQ01853 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcpQ01853 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VcpQ01853 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VcpQ01853 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VcpQ01853 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VcpQ01853 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.84□□□□□ -0.35
VcpQ01853 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Gm7666-201ENSMUST00000146631 819 ntBASIC12.84□□□□□ -0.35
VcpQ01853 Gm9022-201ENSMUST00000182482 992 ntBASIC12.84□□□□□ -0.35
VcpQ01853 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.84□□□□□ -0.35
VcpQ01853 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
VcpQ01853 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.84□□□□□ -0.35
VcpQ01853 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Gm25517-201ENSMUST00000083865 134 ntBASIC12.84□□□□□ -0.35
VcpQ01853 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
VcpQ01853 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcpQ01853 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms