Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm29615-201ENSMUST00000185371 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28224-201ENSMUST00000186078 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm29001-201ENSMUST00000186177 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28292-201ENSMUST00000186593 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28101-201ENSMUST00000187608 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm29076-201ENSMUST00000187689 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28302-201ENSMUST00000187931 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28646-201ENSMUST00000188220 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28205-201ENSMUST00000189177 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm29032-201ENSMUST00000189797 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm28695-201ENSMUST00000190300 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm37448-201ENSMUST00000192795 697 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm7003-201ENSMUST00000195089 312 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm18730-201ENSMUST00000218038 343 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.41□□□□□ -0.58
Nkx3-2P97503 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.4□□□□□ -0.58
Nkx3-2P97503 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gm28450-201ENSMUST00000187349 638 ntBASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gm37986-201ENSMUST00000193285 383 ntBASIC11.4□□□□□ -0.58
Nkx3-2P97503 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.4□□□□□ -0.58
Nkx3-2P97503 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx3-2P97503 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.4□□□□□ -0.58
Nkx3-2P97503 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx3-2P97503 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx3-2P97503 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.4□□□□□ -0.59
Nkx3-2P97503 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx3-2P97503 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms