Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Gm45575-201ENSMUST00000210283 548 ntBASIC13□□□□□ -0.33
CiitaP79621 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13□□□□□ -0.33
CiitaP79621 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13□□□□□ -0.33
CiitaP79621 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Ntng1-201ENSMUST00000051253 327 ntBASIC13□□□□□ -0.33
CiitaP79621 Gm9785-201ENSMUST00000062642 1006 ntBASIC13□□□□□ -0.33
CiitaP79621 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CiitaP79621 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CiitaP79621 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CiitaP79621 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13□□□□□ -0.33
CiitaP79621 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.99□□□□□ -0.33
CiitaP79621 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.99□□□□□ -0.33
CiitaP79621 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Gm13809-201ENSMUST00000117921 597 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Gm9211-201ENSMUST00000182882 975 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Gm38117-201ENSMUST00000194653 939 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Gm5714-201ENSMUST00000197343 566 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Ginm1-202ENSMUST00000065124 300 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CiitaP79621 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.99□□□□□ -0.33
CiitaP79621 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CiitaP79621 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CiitaP79621 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.98□□□□□ -0.33
CiitaP79621 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm13611-201ENSMUST00000118269 318 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm13408-201ENSMUST00000119822 798 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm13263-201ENSMUST00000121271 838 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm13935-201ENSMUST00000121859 798 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm8815-201ENSMUST00000173809 620 ntBASIC12.98□□□□□ -0.33
CiitaP79621 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm9136-201ENSMUST00000193368 454 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm8959-201ENSMUST00000213150 571 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Gm2553-201ENSMUST00000215986 605 ntBASIC12.98□□□□□ -0.33
CiitaP79621 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms