Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.26□□□□□ -0.61
Six5P70178 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.26□□□□□ -0.61
Six5P70178 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Gm17931-201ENSMUST00000208132 634 ntBASIC11.26□□□□□ -0.61
Six5P70178 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.26□□□□□ -0.61
Six5P70178 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Six5P70178 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Six5P70178 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Six5P70178 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.26□□□□□ -0.61
Six5P70178 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Six5P70178 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.25□□□□□ -0.61
Six5P70178 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.25□□□□□ -0.61
Six5P70178 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.25□□□□□ -0.61
Six5P70178 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.25□□□□□ -0.61
Six5P70178 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.25□□□□□ -0.61
Six5P70178 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Gm43962-201ENSMUST00000203898 190 ntBASIC11.25□□□□□ -0.61
Six5P70178 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.25□□□□□ -0.61
Six5P70178 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.25□□□□□ -0.61
Six5P70178 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Six5P70178 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Six5P70178 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Six5P70178 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.25□□□□□ -0.61
Six5P70178 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Six5P70178 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Six5P70178 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.25□□□□□ -0.61
Six5P70178 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Six5P70178 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Six5P70178 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Six5P70178 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Six5P70178 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Six5P70178 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Six5P70178 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.24□□□□□ -0.61
Six5P70178 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.24□□□□□ -0.61
Six5P70178 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Six5P70178 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.24□□□□□ -0.61
Six5P70178 Gm44967-201ENSMUST00000207047 631 ntBASIC11.24□□□□□ -0.61
Six5P70178 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.24□□□□□ -0.61
Six5P70178 Gm5455-201ENSMUST00000058710 715 ntBASIC11.24□□□□□ -0.61
Six5P70178 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.24□□□□□ -0.61
Six5P70178 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Six5P70178 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms