Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Rpl39P62892 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm37580-201ENSMUST00000192408 2800 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm13492-201ENSMUST00000119772 665 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Gm12036-201ENSMUST00000120008 530 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC8.53□□□□□ -1.04
Rpl39P62892 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.53□□□□□ -1.04
Rpl39P62892 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 AC155237.1-201ENSMUST00000226196 1279 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm15823-201ENSMUST00000064305 670 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm8228-201ENSMUST00000189949 2192 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm6189-201ENSMUST00000164487 2082 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.53□□□□□ -1.04
Rpl39P62892 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Rpl39P62892 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8.53□□□□□ -1.04
Rpl39P62892 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl39P62892 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl39P62892 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl39P62892 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rpl39P62892 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.52□□□□□ -1.04
Rpl39P62892 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Rpl39P62892 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl39P62892 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl39P62892 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl39P62892 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Rpl39P62892 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl39P62892 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Rpl39P62892 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl39P62892 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms