Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lsm6P62313 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.56□□□□□ -0.72
Lsm6P62313 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm6963-201ENSMUST00000147879 379 ntBASIC10.56□□□□□ -0.72
Lsm6P62313 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lsm6P62313 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm27516-201ENSMUST00000184237 98 ntBASIC10.56□□□□□ -0.72
Lsm6P62313 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm17931-201ENSMUST00000208132 634 ntBASIC10.56□□□□□ -0.72
Lsm6P62313 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.56□□□□□ -0.72
Lsm6P62313 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lsm6P62313 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.56□□□□□ -0.72
Lsm6P62313 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lsm6P62313 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lsm6P62313 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm5419-201ENSMUST00000119301 527 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Gm12164-201ENSMUST00000121695 551 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm5070-201ENSMUST00000177599 862 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.55□□□□□ -0.72
Lsm6P62313 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Lsm6P62313 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Gm8885-201ENSMUST00000189382 598 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm43630-201ENSMUST00000201550 776 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm6334-201ENSMUST00000207083 228 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm45865-201ENSMUST00000211815 945 ntBASIC10.55□□□□□ -0.72
Lsm6P62313 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm6P62313 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.55□□□□□ -0.72
Lsm6P62313 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms