Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm27731-201ENSMUST00000185192 107 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm40466-201ENSMUST00000212174 422 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.68□□□□□ -0.7
Sf3b6P59708 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sf3b6P59708 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.67□□□□□ -0.7
Sf3b6P59708 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.67□□□□□ -0.7
Sf3b6P59708 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.67□□□□□ -0.7
Sf3b6P59708 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sf3b6P59708 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sf3b6P59708 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Btrc-209ENSMUST00000224478 2194 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sf3b6P59708 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm7029-201ENSMUST00000173226 450 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm4271-201ENSMUST00000174444 973 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm42693-201ENSMUST00000196779 631 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms