Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC16.11■□□□□ 0.17
Nphp4P59240 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC16.11■□□□□ 0.17
Nphp4P59240 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Nphp4P59240 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Nphp4P59240 Gm25766-201ENSMUST00000104101 131 ntBASIC16.11■□□□□ 0.17
Nphp4P59240 Gm12247-201ENSMUST00000117585 670 ntBASIC16.11■□□□□ 0.17
Nphp4P59240 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC16.11■□□□□ 0.17
Nphp4P59240 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nphp4P59240 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Gm17877-201ENSMUST00000192578 814 ntBASIC16.11■□□□□ 0.17
Nphp4P59240 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC16.11■□□□□ 0.17
Nphp4P59240 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC16.11■□□□□ 0.17
Nphp4P59240 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC16.11■□□□□ 0.17
Nphp4P59240 Gm18065-201ENSMUST00000221395 526 ntBASIC16.11■□□□□ 0.17
Nphp4P59240 CT025553.1-201ENSMUST00000226292 299 ntBASIC16.11■□□□□ 0.17
Nphp4P59240 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nphp4P59240 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nphp4P59240 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC16.11■□□□□ 0.17
Nphp4P59240 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC16.1■□□□□ 0.17
Nphp4P59240 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nphp4P59240 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nphp4P59240 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nphp4P59240 AC157950.1-201ENSMUST00000217561 2168 ntBASIC16.1■□□□□ 0.17
Nphp4P59240 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC16.1■□□□□ 0.17
Nphp4P59240 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC16.1■□□□□ 0.17
Nphp4P59240 Gm14071-201ENSMUST00000117817 509 ntBASIC16.1■□□□□ 0.17
Nphp4P59240 Gm11700-201ENSMUST00000119409 403 ntBASIC16.1■□□□□ 0.17
Nphp4P59240 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nphp4P59240 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Gm18986-201ENSMUST00000216029 1986 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Nphp4P59240 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Gm12795-201ENSMUST00000117594 539 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 Gm11500-201ENSMUST00000118237 601 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 Gm15549-201ENSMUST00000121595 622 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC16.09■□□□□ 0.17
Nphp4P59240 Gm25492-201ENSMUST00000157383 129 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Gm21778-201ENSMUST00000178779 471 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 Gm8492-201ENSMUST00000182375 987 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 Gm19015-201ENSMUST00000184002 1189 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC16.09■□□□□ 0.17
Nphp4P59240 Gm35960-201ENSMUST00000202712 767 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC16.09■□□□□ 0.17
Nphp4P59240 Gm19009-201ENSMUST00000223072 823 ntBASIC16.09■□□□□ 0.17
Nphp4P59240 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nphp4P59240 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nphp4P59240 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.09■□□□□ 0.17
Nphp4P59240 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms