Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nup43P59235 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nup43P59235 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nup43P59235 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.34□□□□□ -0.59
Nup43P59235 AY036118-201ENSMUST00000200021 923 ntBASIC11.34□□□□□ -0.59
Nup43P59235 Gm8956-201ENSMUST00000203939 825 ntBASIC11.34□□□□□ -0.59
Nup43P59235 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.34□□□□□ -0.59
Nup43P59235 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nup43P59235 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nup43P59235 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nup43P59235 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.34□□□□□ -0.59
Nup43P59235 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nup43P59235 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nup43P59235 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Nup43P59235 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.33□□□□□ -0.6
Nup43P59235 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.33□□□□□ -0.6
Nup43P59235 Gm14017-201ENSMUST00000121934 386 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.33□□□□□ -0.6
Nup43P59235 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.33□□□□□ -0.6
Nup43P59235 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nup43P59235 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.33□□□□□ -0.6
Nup43P59235 Gm5616-201ENSMUST00000165252 384 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gm8741-201ENSMUST00000174736 384 ntBASIC11.33□□□□□ -0.6
Nup43P59235 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gm18212-201ENSMUST00000211678 889 ntBASIC11.33□□□□□ -0.6
Nup43P59235 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Gm8385-201ENSMUST00000058999 643 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms